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Table 1 KEGG enrichment of DEGs in leaves during regenerated white oak spssssrout growth (p < 0.05)

From: White oak (Quercus fabri Hance) regenerated stump sprouts show few senescence symptoms during 40 years of growth in a natural forest

Pathways L5:L10 L10:L20 L20:L40 L10:L40 L5:L40 L5:L20
Upa Downb Up Down Up Down Up Down Up Down Up Down
Cyanoamino acid metabolism 21 12 0 8 17 7 13 10
Flavonoid biosynthesis 5 4 0 2 4 2 1 5
Phenylpropanoid biosynthesis 42 26 0 10 33 12 35 26
Brassinosteroid biosynthesis 11 0 0 8 7 0 3 3
Starch and sucrose metabolism 33 12 0 8 33 5 26 12
Cutin, suberine and wax biosynthesis 8 2 10 0 11 0 5 1
Fatty acid elongation 11 1 11 0 14 0 7 1
Phenylalanine, tyrosine and tryptophan biosynthesis 11 2 11 2 10 2
Pentose and glucuronate interconversions 17 2 13 2 15 2
DNA replication 16 0 18 1 9 1
Monoterpenoid biosynthesis 0 12 0 8 0 8
Terpenoid backbone biosynthesis 0 3 19 0 6 3
Porphyrin and chlorophyll metabolism 19 0 21 0
Base excision repair 11 0 12 0
RNA transport 63 0 90 0
Arachidonic acid metabolism 12 0 13 0
Plant–pathogen interaction 8 4 5 33
Phagosome 30 1 32 6
Ribosome biogenesis in eukaryotes 29 0 43 0
Glucosinolate biosynthesis 0 3 0 2
Sesquiterpenoid and triterpenoid biosynthesis 7 1 5 0
Circadian rhythm – plant 9 0 12 0
Plant hormone signal transduction 20 8 11 12
Glycosphingolipid biosynthesis – ganglio series 8 0 8 0
Linoleic acid metabolism 1 5 1 4
Proteasome 36 0
Glycerophospholipid metabolism 26 0
  1. aDown in A:B comparisons indicates downregulated in B
  2. bUp in A:B comparisons indicates upregulated in B